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Science In Action

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Aug 12, 2021 • 29min

Methane: A climate solution?

The latest IPCC assessment raised alarm about the rate at which manmade emissions are contributing to climate change. Much of the focus for action is on reducing levels of carbon dioxide, however there is a more potent greenhouse gas, methane, produced by natural and industrial processes which, says Drew Shindell of Duke University and lead author on the Global Methane Assessment, is relatively easy to target for reduction.Neuroscientist John Cryan of University College, Cork in Ireland is interested in the effects our gut microbes can have on our behaviour. It’s an unusual connection and one which he’s been experimenting on in mice. By feeding the faeces of younger mice to older ones he has found that the older ones’ took on some of the younger ones’ behaviour.Ball lightning is the stuff of legend and the supernatural. And yet there are many reported sightings of this phenomenon. Texas State University's Karl Stephan is keen to uncover the science behind these observations. He’s running a crowd sourcing project encouraging people to contribute video recordings of any ball lightening events they might observe.And Chile is home to the oldest known mummies in the World. UNESCO world heritage status has been given to a collection of around 300 mummies from Chile’s northern deserts. The mummies of babies, children and adults are thought to have been created in response to arsenic poisoning in the region around 7,000 years ago. Image: Livestock farm in Brazil Credit: Photo by Igor Do Vale/NurPhoto via Getty ImagesPresenter: Roland Pease Producer: Julian Siddle
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Aug 5, 2021 • 30min

Record-shattering weather

July 2021 saw temperatures in the western US and Canada smash previous records by 5 degrees. And that’s what we should expect, according to a study prepared much earlier but published, coincidentally, just a few days later. A hallmark of rapid climate change, says author Erich Fischer of ETH Zurich, will be an accelerating number of record-shattering, and socially disruptive, events. A large new study on communications and hierarchy across a large range of our ape and monkey relatives has just been published. Lead author Katie Slocombe of the University of York explains the findings: like us, the primates live socially in groups, and there are leaders, but the more tolerant ones are also the more communicative ones. In species with ‘despotic’ leaders, order seems to be maintained with more menacing silence. The double helix of all DNA on earth twists in one direction. But researchers at Tsinghua University in China have made some important steps towards making mirror life, in which the DNA twists in the opposite direction. Chemistry journalist Mark Peplow discusses the significance of this discovery with Roland Pease. One of the benefits of science’s ability to read normal DNA has been to compare human genomes from across the globe – for example in the Human Genome Diversity Project – for what they reveal about both our health – and our past. But sequences from the Middle East have been sadly lacking. The Sanger Institute’s Mohamed Almarri and colleagues have just rectified that, saying that the Middle East played such a key role in the human story. (Photo By Tom Williams/CQ-Roll Call, Inc via Getty Images)Presenter: Roland Pease Editor: Deborah Cohen
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Jul 29, 2021 • 36min

The earliest traces of animal life on earth.

Do rocks found in Canada show animal life 350 million years older than any found before? And, delving to the core of Mars, the guts of cats, and into the life of Steven Weinberg.Prof Elizabeth Turner of Canada's Laurentian University reports in the journal Nature structures in some of the oldest sedimentary rocks that resemble the residue left by sponges such as the sort you might find in a bath. 350 million years older than the oldest such fossils yet identified, if they are left by such animals, they represent a complex life that existed some 90 million years before - it has been supposed - there was even enough oxygen to support such development. As she tells us, rather like previous geologists investigating the deep history of life, Elizabeth has been sitting on this idea since she was a young researcher. Since 2019 NASA's InSight probe has been on the surface of Mars listening for seismic waves from below to try to form a picture of the planet's internal structure. Last week in the journal Science, three papers presented data and analysis and some surprises for planetary scientists trying to work out how a planet that began almost, but not quite, so similar to earth could have turned out so different today. Cambridge University's Dr Sanna Cottaar gives us her take on the exciting findings. Most of our understanding of genetics – diseases and heritability – is derived from decades of deep studies into just a few model species besides humans. But Prof Lesley Lyons runs a lab at the University of Missouri focusing almost entirely on cats. She describes to Roland a proclamation she makes this week to her fellow scientists to do more work into cat genetics and how, because of the similarities between cats and human genomes, that will bring all sorts of benefits to human (and cat) health.Earlier this week we heard of the death of physicist Steven Weinberg - one of the giants of 20th century particle physics and cosmology. Roland presents recordings and reminiscences of a remarkable scientist who provided so much insight into the first 3 minutes of our universe's existence...Image: Field locations in Northwest Territories, Canada Credit: Elizabeth Turner, Laurentian UniversityPresenter: Roland Pease Producer: Alex Mansfield
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Jul 22, 2021 • 34min

Your molecular machinery, now in 3D

Back in November it was announced that an AI company called DeepMind had essentially cracked the problem of protein folding – that is they had managed to successfully predict the 3D structures of complex biochemical molecules by only knowing the 2D sequence of amino acids from which they are made.They are not the only team to use machine learning to approach the vast amounts of data involved. But last week, they released the source code and methodology behind their so called AlphaFold2 tool. Today, they are publishing via a paper in the journal Nature, a simply huge database of predicted structures including most of the human proteome and 20 other model species such as yes, mice. The possibilities for any biochemists are very exciting. As DeepMind CEO Demis Hassabis tells Roland Pease, they partnered with the European Molecular Biology Laboratory to make over 350,000 protein predictions available to researchers around the world free of charge and open sourced. Dr Benjamin Perry of the Drugs for Neglected Diseases Initiative told us how it may help in the search for urgently needed drugs for difficult diseases such as Chagas disease. Prof John McGeehan of the Centre for Enzyme Innovation at Portsmouth University in the UK is on the search for enzymes that might be used to digest otherwise pollutant plastics. He received results (that would have taken years using more traditional methods) back from the AlphaFold team in just a couple of days.Prof Julia Gog of Cambridge University is a biomathematician who has been modelling Covid epidemiology and behaviour. In a recent paper in Royal Society Open Science, she and colleagues wonder whether the vaccination strategy of jabbing the most vulnerable in a population first, rather than the most gregarious or mobile, is necessarily the optimal way to protect them. Should nations still at an early stage in vaccine rollout consider her model?And did you know that elephants can hear things up to a kilometre away through their feet? And that sometimes they communicate by bellowing and rumbling such the ground shakes? Dr Beth Mortimer of Oxford University has been planting seismic detectors in savannah in Kenya to see if they can tap into the elephant messaging network, to possibly help conservationists track their movements.Image: Protein folding Credit: Nicolas_/iStock/Getty ImagesPresenter: Roland Pease Producers: Alex Mansfield and Samara Linton
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Jul 15, 2021 • 31min

Science when the funding dries up

This week the UK parliament voted to accept the Government’s continued cap on Official Development Aid. This disappointed many researchers around the world, funded directly and indirectly through various scientific funding structures enabling international collaboration on some of the global challenges facing all of us. These funding mechanisms make for a small fraction of the overall amount, but they have been hit hard, with many projects closing altogether.There had been hope amongst the scientific community that the cap – from 0.7% down to 0.5% of the UK’s Gross Domestic Income – might have been in place just for a year. But it seems like the criteria set to judge when the level of aid might rise again imply that it is unlikely to happen for several years at the earliest. What, asks Science in Action, does that mean to the world of scientific collaboration on such topics as climate change, contagious disease, and emergency planning?Researchers Chris Trisos and Jenni Barclay, with journalist Robin Bisson of Research Professional News, update us on the story.In Zambia, where covid testing remains scarce, a project run by Boston University’s Christopher Gill has been estimating the prevalence of covid in the capital Lusaka by taking nasal swab samples from the noses of around one in five of those recently deceased, in the morgue of a major hospital. Tantalisingly, his team have seen over the last few months a sharp rise in cases to the extent that in June, nearly 90 percent of the cadavers tested positive for covid. But as Chris describes, unrelated to the UK cuts, their funding has now run out, so where the graph leads from here we may not learn for a long time.Presented by Roland Pease Produced by Alex Mansfield.(Image: Getty Images)
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Jul 8, 2021 • 34min

Human induced climate change heats up fast

Scientists say the record-breaking Pacific North-West heatwave of recent weeks must have been caused by human induced climate change, but as Geert Jan van Oldenborgh explains to Roland Pease, despite a herculean effort to analyse the event in just a week, the precise mechanism to cause such an extreme and sudden event is so far bewildering climate modellers, exceeding even worst expectations. Looking to the skies, Rosita Kokotanekova of the European Southern Observatory and colleagues have been getting excited about the discovery of a comet maybe twice as large as any observed before. Being so big, it has been spotted much further out from the sun and – if the best telescopes can be convinced to join the fun – will provide astronomers a chance to observe the core of the comet before the solar heat induces a gaseous coma to form as it nears the point in its orbit closest to the sun. It will be around for the next decade before continuing its several million year journey around our mutual star.But it won’t get terribly close to earth, at least not as close as lumps of an asteroid that fell onto a driveway in the UK earlier this year. Dr Ashley King of the UK’s Natural History Museum is leading a consortium of scientists (benefitting from a rapid research grant by the UK’s STFC) who have now officially classified it and named it. The Winchcombe meteorite is a CM carbonaceous chondrite, meaning it represents the unspoilt early building blocks of the solar system. Falling like 4.5 billion year old leftover celestial lego, only a few are known around the world but perhaps none have been in scientists hands in such a short period of time, continuing its pristine survival.Dr Pablo Tsukayama has published a preprint paper announcing a new variant of interest in the ongoing evolution of the SARS-CoV2 virus. Now named by the WHO as the Lambda variant, it seems it has driven the pandemic for much of this year in Peru – as much as 80% of cases – and large fractions of the outbreak elsewhere in South America. But as Pablo suggests, the reason we don’t know as much about it as for example the Alpha or Delta variants is likely because it hasn’t thus far affected the countries best equipped to do the analysis. Maybe that could change. Image: Wildfires in Lytton, British Columbia Credit: ProPics Canada Media Ltd/Getty ImagesPresenter: Roland Pease Producer: Alex Mansfield
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Jul 1, 2021 • 33min

Insects in incredible detail

The Natural History Museum in London holds a massive collection of insects. It asked researchers at the Diamond light source, a facility near Oxford, to develop a high throughput X-ray microscope to take 3D scans of them all. Roland Pease has been to see the new technology in action.Many people seeking compensation for the impacts of climate change are turning to the law courts. Successes so far have been few. Oxford University’s Friederike Otto, who specialises in connecting weather extremes to the greenhouse effect, has just published a paper looking at the challenge in bringing successful climate lawsuits. Spacecraft will be returning to Venus in the next decade with the recent approval of two NASA missions to the planet, and one from the European Space Agency, ESA. Philippa Mason of Imperial College is a planetary geologist on that mission, Envision. She plans to use radar to peer through that dense and interesting atmosphere to follow up evidence of volcanic activity and tectonics on the surface beneath. A few years ago synthetic biologist Jim Collins of Harvard found a way to spill the contents of biological cells onto … basically … blotting paper, in a way that meant by just adding water, all the biochemical circuitry could be brought back to life. With a bit of genetic engineering, it could be turned into a sensor to detect Ebola and Nipah viruses. His team have kept developing the idea, and this week they report success in a smart face mask that can detect SARS-CoV-2 in your breath. (Image: Hairy Fungus Beetle - Prepared by Malte Storm. Credit: Diamond light Source Ltd)Presenter: Roland Pease Producer: Alex Mansfield
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Jun 24, 2021 • 40min

Tales of unexpected DNA data

This week Jesse Bloom of Seattle’s Fred Hutchinson Cancer Research has published an account of some DNA sequence data he located in an internet archive, despite it having been removed from the US NIH’s Sequence Read Archive. He tells Roland Pease of its significance to our understanding of the beginning of the Covid pandemic, but also, of more general interest, to what it might tell scientists about the full availability of relevant virological evidence.Elsewhere, Elena Zavala of the Max Planck Institute for Evolutionary Anthropology in Leipzig has been using new techniques for sequencing tiny fragments of mitochondrial DNA found in layers of mud to trace a long narrative of different evolutionary species of human and animal and their changing fortunes. As she describes in a paper published in Nature, sediments from different depths of the floor of the famous Denisova cave tell a long story of different humans (Denisovan and Neanderthal), bears, hyenas and other animals living there over different periods in the last 250 thousand years.Over in the journal Science, several papers describe a new type of early hominin found in Nesher Rambla, Israel, that may be yet another instance of a human species that didn’t quite make it. As Marta Lahr, professor in human evolutionary biology at Cambridge University tells Roland the new findings all point to the bigger question – given the similar ages, technologies, and even neighbourhoods that all these types of hominin shared, just what was it about our own direct ancestor species that enabled us to take over the world?Since almost the beginning of the Covid pandemic, in some parts of the world, the drug Ivermectin has been repurposed as a therapy against the disease, with some even believing it to convey protection against infection – a situation not without tragic consequences. The evidence for any meaningful effect has been less than obvious to most scientists and health authorities. Not the first controversial drug in the story of Covid-19, the discourse has led to abuse directed at scientists and officials, and scathing arguments across social media. As Oxford University’s PRINCIPLE trial this week begins to include Ivermectin in its investigations, BBC Reality Check’s Jack Goodman reports on the Ivermectin’s tortuous path.(Image: Getty Images)Presenter: Roland Pease Producer: Alex Mansfield
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Jun 17, 2021 • 38min

Doubling Earth’s energy imbalance

Nasa scientists have observed that the Earth’s energy imbalance has doubled in just 15 years. As greenhouse gas atmospheric concentrations have risen, so too has the difference between the total amount of energy being absorbed from the sun, and the total amount being reradiated back into space. Meanwhile, as we all heat up, scientists at the LIGO Gravitational Wave Observatory have managed to do something very cool with their mirrors. Such is the precision with which the detectors have been engineered, they have managed to effectively reduce the temperature of one of the big 10kg reflectors to such an extent that it betrays its quantum state, as if it were simply one big subatomic particle. So what? Roland Pease finds out. Presenter: Roland Pease Producer: Alex Mansfield(Photo: Giant sun in the horizon. Credit: Getty Images)
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Jun 10, 2021 • 33min

Evolving viral variant trickery

Dr. Clare Jolly and colleagues have been looking at how the first of the major covid variants – alpha - evolved to be more transmissible. Whilst a lot of attention has been on the spike binding areas of the virus and the effectiveness of antibodies from either vaccine or prior infection, their preprint paper this week reports how the virus evolved an ability to inhibit our bodies innate virus response once it has infected a cell.Prof Dan Shugar and colleagues have been studying the conditions that led to the tragic rock and ice avalanche in February in Chamoli, Uttarakhand. 27 million cubic meters of rock and ice broke off the steep mountainside and plummeted almost 2km down into the valleys below. Using satellite, seismic and video data the scientists have investigated the sequence of events that led to the tragic deaths of 204 people in the floods that followed. It was a thankfully rare combination of geography and geology and events, but highlights the care that should be taken when building the growing number of hydroelectric plants in high mountainous areas. But avalanches don’t just happen in mountains. A year before, in a canyon under the sea near the outflow of the Congo river, a sediment avalanche rumbled on for almost two days along some 1,100km of the ocean floor. And as Prof Pete Talling describes, whilst it didn’t trigger a tsunami, it did sever cables supplying internet connectivity between South Africa and Nigeria.And the BBC’s Samara Linton reports on research into a type of DNA you perhaps haven’t heard of – Z-DNA. It winds the other way to what we consider normal DNA, and scientists are finally beginning to understand its role in many human diseases, including cancer, with some future promise of novel therapeutics. Presented by Roland Pease Produced by Alex Mansfield (Image: Getty Images)

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