Code for Thought

Bastian Greshake-Tzovaras and I were accepted as Fellows of the Software Sustainability Institute around the same time. Bastian, trained in biology, has done a lot of work on "citizen science" and the Open Humans platform. The latter of which we discuss in a bit more detail as well as two projects Bastian has been working on.Linkshttps://www.openhumans.org Open Humans Platformhttps://academic.oup.com/gigascience/article/8/6/giz076/5523201 Journal article on open humans platformGet in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

In this episode we speak to Shoaib Sufi and Rachael Ainsworth from the Software Sustainability Institute’s Community team about their Event Organisation Guide and some upcoming SSI events.The Event Organisation Guide brings together years of experience of the SSI in organising events. It covers different stages of the event organisation process from idea through feasibility, sign off, running your event project and closing down. The guide can be tailored to your needs, giving hints and tips on varied subjects such as venue, catering, budget, agenda, publicity and more. Read the Event Organisation Guide on Read the Docs.If you’d like to raise any issues, offer suggestions or get involved, you can use the GitHub project associated with the guide. Read how SSI Communications Manager Selina Aragon used the guide to plan the first Research Software Camp in this blog post and find out more about our upcoming Research Software Camp on supporting mental health in research.Read Shoaib’s blog post on Behind the scenes: SSI Event Organisation Guide which explores the how and why of the guide.Find out more about Collaborations Workshop 2023 (CW23). Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

In this Halloween special, Colin Sauze, a Research Software Engineer at the University of Aberystwyth, tells us about when his code set the lab on fire. Hear about what went wrong, how his colleagues and superiors reacted, and tips for our listeners in this second edition of the Software Horror Stories series.If you have comments or suggestions, please tag @Code_4_Thought on Twitter or email us at info@software.ac.uk.Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

This first episode of “Code for Thought ByteSized” is based on the first session in the Byte-sized RSE interactive research software training series. The session, looking at open source software licensing, took place online on Tuesday 18th October.Byte-sized RSE is presented in collaboration with the UNIVERSE-HPC project.Disclaimer: The presenters and content producers for this podcast are not lawyers and do not have any legal background. The material in this podcast is not legal advice and must not be considered as such. There may be errors and we accept no responsibility or liability for actions you take based on this material. The podcast is intended to provide some high-level general background on open source software licensing and to raise awareness of the area. The content is based on our understanding and experience as research software engineers but this may not be correct in all cases. If you have questions or are unsure about any legal aspects relating to licensing of software that you are making available to others, talk to a legal professional.Some useful linksGNU General Public License v3.0: https://www.gnu.org/licenses/gpl-3.0.en.html BSD-3-Clause Licence: https://opensource.org/licenses/BSD-3-Clause MIT Licence: https://opensource.org/licenses/MIT The Unilicense: https://unlicense.org/ Creative Commons License: https://creativecommons.org/ Links to specific Creative Commons Licenses:CC-BY: https://creativecommons.org/licenses/by/4.0/ CC-BY-SA: https://creativecommons.org/licenses/by-sa/4.0/ CC-BY-NC: https://creativecommons.org/licenses/by-nc/4.0/ CC0: https://creativecommons.org/publicdomain/zero/1.0/Full details on Creative Commons licenses can be found at https://creativecommons.org/about/cclicenses/ GitHub information on licensing a repository (GitHub documentation): Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

After 3 years, the RSE Conference returned to an in-person event, this time held at the Frederick Douglas Centre in Newcastle, UK.Apart from meeting people that I only met online so far, it was also the first RSE conference for me personally and the first time I recorded with a live audience. The subject of the event was: RSE the next 10 years. Now that we passed the 10th anniversary of the birth of research software engineering as we know - what will the next 10 years bring.With me on the panel wereIdil Ozdemir (University College London)Simon Hettrick (Software Sustainability Institute)Jennifer Richards (University of Newcastle)Anika Cawthorn (University College London)Michael James (EPSRC - UKRI)https://rsecon2022.society-rse.org RSE Conference 2022 site with links to the programhttps://www.software.ac.uk Software Sustainability Institutehttps://society-rse.org Society for Research Software Engineering in the UKGet in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

For this episode I am very excited to talk to Ben Goldacre. Ben has an outstanding career in medicine, science and science communication and is the author of many articles and books, like e.g. "Bad Science". Today is he running the Bennett Institute for Applied Data Science in Oxford, UK.I met with Ben Goldacre earlier this year (2022) to discuss his report on 'Better, Broader, Safer: Using Health Data for Research and Analysis'. This report, published in April 2022 and commissioned by the UK government, is based on more than 300 individual interviews and many more with key stakeholder groups. One of the key findings and recommendations is the need for proper software engineering. Needless to say that RSEs play an important part in this. In fact, Ben has been a strong supporter and promoter for Research Software Engineering as well as open science and software. Here a few linkshttps://www.phc.ox.ac.uk/team/ben-goldacre Ben Goldacre's web-sitehttps://twitter.com/bengoldacre Ben on Twitterhttps://www.gov.uk/government/publications/better-broader-safer-using-health-data-for-research-and-analysis - 'Better, Broader, Safer: Using Health Data for Research and Analysis' report, April 2022https://www.bennett.ox.ac.uk Bennett InstituteLicence: https://creativecommons.org/licenses/by-sa/4.0/Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

2022 Software Sustainability Institute (SSI) Fellow Sophia Batchelor speaks to SSI Communications Officer Jacalyn Laird about her Fellowship plans.Find out more about the Turing Way and their online Collaboration Cafe.Follow Sophia on Twitter: https://twitter.com/brainonsiliconLicence: https://creativecommons.org/licenses/by-sa/4.0/Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

Welcome back to another season of Code for Thought. And I'd like to kick it off with an interview with Bastien Guerry. Working for the French government, Bastien promotes the use, creation and distribution of Free Software. And in our conversation we discuss the four freedoms as defined by the Free Software Foundation.Bastien is also an active member of the Emacs community and a contributor to one of the modes: Org mode - a note taking facility. Having used Emacs for a long time it's good to see that it is alive and well. https://bzg.fr/en/libreplanet2022-notes/ Bastien's blog and introhttps://www.fsf.org The Free Software Foundationhttps://www.gnu.org/licenses/gpl-3.0.en.html GPL licence https://fosdem.org/2022/schedule/event/open_research_french_ecosystem/ Bastien's presentation on open software at FOSDEM early 2022 https://www.gnu.org/software/emacs/ - YES, it's EMACShttps://orgmode.org Emac's Org mode for note taking etcLicence: https://creativecommons.org/licenses/by-sa/4.0/Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

The way that the Research Excellence Framework (REF) exercise is conducted overlooks many of the people who are vital to the success of research. In this episode we hear from Gemma Derrick, part of the organising committee for the Hidden REF, which recognises all research outputs and every role that makes research possible.Publications rarely name all of the people who make research possible, yet these were the basis for 97% of the outputs submitted to REF 2014. This is not the fault of the REF itself: the guidelines allow submission into a wide range of categories, from software to musical compositions. But with so much funding reliant on the results, universities are highly risk-averse in what they will submit. Publications are well understood in academia, so they are almost the only output submitted to REF – and this means the work of many people goes unrecognised. The goal of the Hidden REF is to celebrate all research outputs and the people who make them possible.Visit the Hidden REF website: https://hidden-ref.org/. Licence: https://creativecommons.org/licenses/by-sa/4.0/Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/

Open Science is a broad term. While in Paris in 2022 I had the pleasure of meeting Teresa Gomez-Diaz from the Université Gustave Eiffel for my very first face to face interview. In it we discuss what the term Open Science entails and how free/open software fit into it. For some years, Teresa Gomez-Diaz has been working with others to arrive at a common understanding of the term. Together with her collaborators they provided a definition that rests on three pillars: Open Access (publication), Free/Open Software, Open Data.As for research software, Teresa stresses the importance of software licensing. And in the course we touch on different strategies how that can be accomplished with GNU GPL licence (strong copyleft) and other Free/Open Source Software licences. Here are some references for this episode, with papers by Teresa Gomez-Diaz and co-authors. The Twitter link below is with respect to the "mushroom" of Open Science we discuss  during the episode.https://f1000research.com/articles/8-1353/v2 On the evaluation of research software: the CDUR procedurehttps://zenodo.org/record/4577066#.Ys0lfi8w1k4 Towards an Open Science definition as a political and legal framework: on the sharing and dissemination of research outputshttps://zenodo.org/record/6433533#.Ys0l4C8w1k4 The future of Open Science asks for a common understandinghttps://twitter.com/evamen/status/844158610225664000 http://igm.univ-mlv.fr/~teresa/logicielsLIGM/documents/CoursLL/2022avril_RS_UGE_TGD.pdf course material (in French) for the course on research software (including licences,Open Science definition etc.) by Teresa Gomez-DiazThe Unesco recommendation on Open Science can be found onhttps://unesdoc.unesco.org/ark:/48223/pf0000379949 A definition of 'copyleft'https://www.gnu.org/licenses/copyleft.en.html Licence: https://creativecommons.org/licenses/by-sa/4.0/Get in touchThank you for listening! Merci de votre écoute! Vielen Dank für´s Zuhören! If you're like to support this show, you can leave a little tip at https://en.tipeee.com/code-for-thought-podcast/ Contact Details/ Coordonnées / Kontakt: Email mailto:peter@code4thought.org UK RSE Slack (ukrse.slack.com): @code4thought or @piddie US RSE Slack (usrse.slack.com): @Peter Schmidt Mastodon: https://fosstodon.org/@code4thought or @code4thought@fosstodon.org Bluesky: https://bsky.app/profile/code4thought.bsky.social LinkedIn: https://www.linkedin.com/in/pweschmidt/ (personal Profile)LinkedIn: https://www.linkedin.com/company/codeforthought/ (Code for Thought Profile) This podcast is licensed under the Creative Commons Licence: https://creativecommons.org/licenses/by-sa/4.0/